BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B09LP1|AL428500
(245 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1588 469 e-133
>3x_Contig1588
Length = 14692
Score = 469 bits (233), Expect = e-133
Identities = 239/245 (97%)
Strand = Plus / Plus
Query: 1 gatcaagttagcatcggtaccaaatwcgaaatacgawccagaggaaccagcctctatccg 60
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 3828 gatcaagttagcatcggtaccaaatacgaaatacgaaccagaggaaccagcctctatccg 3887
Query: 61 ttgcaaatcgaaatgagcaaactctattgcgtgcacgcmatcttccaccacggcatcgaa 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3888 ttgcaaatcgaaatgagcaaactctattgcgtgcacgcaatcttccaccacggcatcgaa 3947
Query: 121 ttcgttcctactatcagtactcttgggtacgggtcctgatttmmtcgacggttggaaaac 180
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3948 ttcgttcctactatcagtactcttgggtacgggtcctgatttaatcgacggttggaaaac 4007
Query: 181 cgaatactcaatcttaatttgtgactgacgagccttatccggatccagatgaracacctg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4008 cgaatactcaatcttaatttgtgactgacgagccttatccggatccagatgagacacctg 4067
Query: 241 actta 245
|||||
Sbjct: 4068 actta 4072
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 769
Number of Sequences: 1807
Number of extensions: 769
Number of successful extensions: 13
Number of sequences better than 1.0e-20: 1
length of query: 245
length of database: 10,358,551
effective HSP length: 15
effective length of query: 230
effective length of database: 10,331,446
effective search space: 2376232580
effective search space used: 2376232580
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.2 bits)